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Graph Database :: Data Schema

Graph Database :: Data Schema

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Attributes of class EntityWithAccessionedSequence
Attribute name Cardinality Value Type Attribute Origin
authored 1 PhysicalEntity
catalystActivities + PhysicalEntity
compartment + PhysicalEntity
componentOf + PhysicalEntity
consumedByEvent + PhysicalEntity
created 1 DatabaseObject
crossReference + PhysicalEntity
dbId 1
  • Long
DatabaseObject
definition 1
  • String
PhysicalEntity
disease + PhysicalEntity
displayName 1
  • String
DatabaseObject
edited + PhysicalEntity
endCoordinate 1
  • Integer
EntityWithAccessionedSequence
figure + PhysicalEntity
goCellularComponent 1 PhysicalEntity
hasModifiedResidue + EntityWithAccessionedSequence
inDisease 1
  • Boolean
PhysicalEntity
inferredFrom + PhysicalEntity
inferredTo + PhysicalEntity
isRequired + PhysicalEntity
literatureReference + PhysicalEntity
memberOf + PhysicalEntity
modified 1 DatabaseObject
name +
  • String
PhysicalEntity
negativelyRegulates + PhysicalEntity
positivelyRegulates + PhysicalEntity
producedByEvent + PhysicalEntity
referenceEntity 1 EntityWithAccessionedSequence
referenceType 1
  • String
EntityWithAccessionedSequence
repeatedUnitOf + PhysicalEntity
reviewed + PhysicalEntity
revised + PhysicalEntity
schemaClass 1
  • String
DatabaseObject
species 1 GenomeEncodedEntity
stId 1
  • String
DatabaseObject
startCoordinate 1
  • Integer
EntityWithAccessionedSequence
summation + PhysicalEntity
systematicName 1
  • String
PhysicalEntity
Referrals of class 'EntityWithAccessionedSequence' instances
Attribute Origin Attribute name Cardinality Value Type
CatalystActivity activeUnit +
ReactionLikeEvent entityOnOtherCell +
CandidateSet hasCandidate +
Complex hasComponent +
EntitySet hasMember +
ReactionLikeEvent input +
ReactionLikeEvent output +
EntityFunctionalStatus physicalEntity 1
Regulation regulator 1
Polymer repeatedUnit +
ReactionLikeEvent requiredInputComponent +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.