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CCNK [nucleoplasm]
Stable Identifier
R-SCE-6796619
Type
Protein [EntityWithAccessionedSequence]
Species
Saccharomyces cerevisiae
Compartment
nucleoplasm
Synonyms
P46962
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Saccharomyces cerevisiae)
RNA Polymerase II Transcription (Saccharomyces cerevisiae)
Generic Transcription Pathway (Saccharomyces cerevisiae)
Transcriptional Regulation by TP53 (Saccharomyces cerevisiae)
TP53 Regulates Transcription of DNA Repair Genes (Saccharomyces cerevisiae)
CCNK binds CDK13 (Saccharomyces cerevisiae)
CCNK [nucleoplasm] (Saccharomyces cerevisiae)
CCNK:CDK13 [nucleoplasm] (Saccharomyces cerevisiae)
CCNK [nucleoplasm] (Saccharomyces cerevisiae)
CDK12 phosphorylates RNA Pol II CTD at DNA repair genes (Saccharomyces cerevisiae)
CCNK:CDK12:CDK12-Phosphorylated Elongation Complex at DNA repair genes [nucleoplasm] (Saccharomyces cerevisiae)
CCNK:CDK12 [nucleoplasm] (Saccharomyces cerevisiae)
CCNK [nucleoplasm] (Saccharomyces cerevisiae)
CDK12-Phosphorylated Elongation Complex [nucleoplasm] (Saccharomyces cerevisiae)
CDK12-phosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Saccharomyces cerevisiae)
P-TEFb complex [nucleoplasm] (Saccharomyces cerevisiae)
CCNT1,CCNT2,CCNK [nucleoplasm] (Saccharomyces cerevisiae)
CCNK [nucleoplasm] (Saccharomyces cerevisiae)
CCNK:CDK12:Elongation Complex at DNA Repair Genes [nucleoplasm] (Saccharomyces cerevisiae)
CCNK:CDK12 [nucleoplasm] (Saccharomyces cerevisiae)
CCNK [nucleoplasm] (Saccharomyces cerevisiae)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Saccharomyces cerevisiae)
Hyperphosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Saccharomyces cerevisiae)
P-TEFb complex [nucleoplasm] (Saccharomyces cerevisiae)
CCNT1,CCNT2,CCNK [nucleoplasm] (Saccharomyces cerevisiae)
CCNK [nucleoplasm] (Saccharomyces cerevisiae)
RNA Polymerase II Pre-transcription Events (Saccharomyces cerevisiae)
2-4 nt.backtracking of Pol II complex on the template leading to elongation pausing (Saccharomyces cerevisiae)
Paused processive elongation complex [nucleoplasm] (Saccharomyces cerevisiae)
P-TEFb complex [nucleoplasm] (Saccharomyces cerevisiae)
CCNT1,CCNT2,CCNK [nucleoplasm] (Saccharomyces cerevisiae)
CCNK [nucleoplasm] (Saccharomyces cerevisiae)
Processive elongation complex [nucleoplasm] (Saccharomyces cerevisiae)
P-TEFb complex [nucleoplasm] (Saccharomyces cerevisiae)
CCNT1,CCNT2,CCNK [nucleoplasm] (Saccharomyces cerevisiae)
CCNK [nucleoplasm] (Saccharomyces cerevisiae)
7-14 nt. Backtracking of Pol II complex on the template leading to elongation arrest (Saccharomyces cerevisiae)
Processive elongation complex [nucleoplasm] (Saccharomyces cerevisiae)
P-TEFb complex [nucleoplasm] (Saccharomyces cerevisiae)
CCNT1,CCNT2,CCNK [nucleoplasm] (Saccharomyces cerevisiae)
CCNK [nucleoplasm] (Saccharomyces cerevisiae)
Abortive termination of elongation after arrest (Saccharomyces cerevisiae)
Aborted elongation complex after arrest [nucleoplasm] (Saccharomyces cerevisiae)
P-TEFb complex [nucleoplasm] (Saccharomyces cerevisiae)
CCNT1,CCNT2,CCNK [nucleoplasm] (Saccharomyces cerevisiae)
CCNK [nucleoplasm] (Saccharomyces cerevisiae)
Processive elongation complex [nucleoplasm] (Saccharomyces cerevisiae)
P-TEFb complex [nucleoplasm] (Saccharomyces cerevisiae)
CCNT1,CCNT2,CCNK [nucleoplasm] (Saccharomyces cerevisiae)
CCNK [nucleoplasm] (Saccharomyces cerevisiae)
Formation of P-TEFb complex (Saccharomyces cerevisiae)
CCNT1,CCNT2,CCNK [nucleoplasm] (Saccharomyces cerevisiae)
CCNK [nucleoplasm] (Saccharomyces cerevisiae)
P-TEFb complex [nucleoplasm] (Saccharomyces cerevisiae)
CCNT1,CCNT2,CCNK [nucleoplasm] (Saccharomyces cerevisiae)
CCNK [nucleoplasm] (Saccharomyces cerevisiae)
Resumption of elongation after recovery from pausing (Saccharomyces cerevisiae)
Paused processive elongation complex [nucleoplasm] (Saccharomyces cerevisiae)
P-TEFb complex [nucleoplasm] (Saccharomyces cerevisiae)
CCNT1,CCNT2,CCNK [nucleoplasm] (Saccharomyces cerevisiae)
CCNK [nucleoplasm] (Saccharomyces cerevisiae)
Processive elongation complex [nucleoplasm] (Saccharomyces cerevisiae)
P-TEFb complex [nucleoplasm] (Saccharomyces cerevisiae)
CCNT1,CCNT2,CCNK [nucleoplasm] (Saccharomyces cerevisiae)
CCNK [nucleoplasm] (Saccharomyces cerevisiae)
TFIIS-mediated recovery of elongation from arrest (Saccharomyces cerevisiae)
Processive elongation complex [nucleoplasm] (Saccharomyces cerevisiae)
P-TEFb complex [nucleoplasm] (Saccharomyces cerevisiae)
CCNT1,CCNT2,CCNK [nucleoplasm] (Saccharomyces cerevisiae)
CCNK [nucleoplasm] (Saccharomyces cerevisiae)
RNA Polymerase II Transcription Elongation (Saccharomyces cerevisiae)
Addition of nucleotides leads to transcript elongation (Saccharomyces cerevisiae)
Elongation complex [nucleoplasm] (Saccharomyces cerevisiae)
Early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm] (Saccharomyces cerevisiae)
P-TEFb complex [nucleoplasm] (Saccharomyces cerevisiae)
CCNT1,CCNT2,CCNK [nucleoplasm] (Saccharomyces cerevisiae)
CCNK [nucleoplasm] (Saccharomyces cerevisiae)
Processive elongation complex [nucleoplasm] (Saccharomyces cerevisiae)
P-TEFb complex [nucleoplasm] (Saccharomyces cerevisiae)
CCNT1,CCNT2,CCNK [nucleoplasm] (Saccharomyces cerevisiae)
CCNK [nucleoplasm] (Saccharomyces cerevisiae)
Pol II elongation complex moves on the template as transcript elongates (Saccharomyces cerevisiae)
Elongation complex prior to separation [nucleoplasm] (Saccharomyces cerevisiae)
P-TEFb complex [nucleoplasm] (Saccharomyces cerevisiae)
CCNT1,CCNT2,CCNK [nucleoplasm] (Saccharomyces cerevisiae)
CCNK [nucleoplasm] (Saccharomyces cerevisiae)
Processive elongation complex [nucleoplasm] (Saccharomyces cerevisiae)
P-TEFb complex [nucleoplasm] (Saccharomyces cerevisiae)
CCNT1,CCNT2,CCNK [nucleoplasm] (Saccharomyces cerevisiae)
CCNK [nucleoplasm] (Saccharomyces cerevisiae)
Separation of elongating transcript from template (Saccharomyces cerevisiae)
Elongation complex prior to separation [nucleoplasm] (Saccharomyces cerevisiae)
P-TEFb complex [nucleoplasm] (Saccharomyces cerevisiae)
CCNT1,CCNT2,CCNK [nucleoplasm] (Saccharomyces cerevisiae)
CCNK [nucleoplasm] (Saccharomyces cerevisiae)
Elongation complex with separated and uncleaved transcript [nucleoplasm] (Saccharomyces cerevisiae)
P-TEFb complex [nucleoplasm] (Saccharomyces cerevisiae)
CCNT1,CCNT2,CCNK [nucleoplasm] (Saccharomyces cerevisiae)
CCNK [nucleoplasm] (Saccharomyces cerevisiae)
RNA polymerase II transcribes snRNA genes (Saccharomyces cerevisiae)
CDK7 phosphorylates serine-5 and serine-7 of heptad repeats in C-terminal domain of RNA polymerase II at snRNA promoter (Saccharomyces cerevisiae)
RNA polymerase II (phosphoserine-5,7):Initiation factors:CDK7:snRNA gene [nucleoplasm] (Saccharomyces cerevisiae)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Saccharomyces cerevisiae)
P-TEFb complex [nucleoplasm] (Saccharomyces cerevisiae)
CCNT1,CCNT2,CCNK [nucleoplasm] (Saccharomyces cerevisiae)
CCNK [nucleoplasm] (Saccharomyces cerevisiae)
RNA polymerase II (unphosphorylated):Initiation factors at promoter of snRNA gene [nucleoplasm] (Saccharomyces cerevisiae)
RNA polymerase II (unphosphorylated):Initiation factors [nucleoplasm] (Saccharomyces cerevisiae)
P-TEFb complex [nucleoplasm] (Saccharomyces cerevisiae)
CCNT1,CCNT2,CCNK [nucleoplasm] (Saccharomyces cerevisiae)
CCNK [nucleoplasm] (Saccharomyces cerevisiae)
RPAP2 binds RNA polymerase II phosphorylated at serine-7 residues of heptad repeats in the C-terminal domain (Saccharomyces cerevisiae)
RNA polymerase II (phosphoserine-5,7):Initiation factors:CDK7:snRNA gene [nucleoplasm] (Saccharomyces cerevisiae)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Saccharomyces cerevisiae)
P-TEFb complex [nucleoplasm] (Saccharomyces cerevisiae)
CCNT1,CCNT2,CCNK [nucleoplasm] (Saccharomyces cerevisiae)
CCNK [nucleoplasm] (Saccharomyces cerevisiae)
RPAP2:RPRD1A,B:RPRD2:RNA polymerase II (phosphoserine-5,7):Initiation factors:snRNA gene [nucleoplasm] (Saccharomyces cerevisiae)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Saccharomyces cerevisiae)
P-TEFb complex [nucleoplasm] (Saccharomyces cerevisiae)
CCNT1,CCNT2,CCNK [nucleoplasm] (Saccharomyces cerevisiae)
CCNK [nucleoplasm] (Saccharomyces cerevisiae)
External Reference Information
External Reference
UniProt:P46962
Reference Genes
BioGPS Gene:853450
ENSEMBL:YJL006C
KEGG Gene (Saccharomyces cerevisiae (strain RM11-1a)):YJL006C
Monarch:853450
NCBI Gene:853450
SGD:YJL006C
Reference Transcript
RefSeq:NM_001181440.1
Other Identifiers
4932.YJL006C
AAC49077.1
CAA89296.1
DAA08785.1
EntrezGene:853450
GO:0003674
GO:0005575
GO:0005634
GO:0005654
GO:0005730
GO:0005737
GO:0005829
GO:0006351
GO:0006354
GO:0006360
GO:0006366
GO:0006397
GO:0006417
GO:0006468
GO:0006974
GO:0008150
GO:0016538
GO:0030234
GO:0031399
GO:0032786
GO:0045737
GO:0045903
GO:0045943
GO:0045944
GO:0051726
GO:0070692
GO:1901409
IPR006671
IPR013763
IPR036915
NM_001181440.1
NP_012528.1
PF00134
SM00385
UPI000005323C
YJL006C
YJL006C_mRNA
Participant Of
input
CCNK binds CDK13
hasComponent
CCNK:CDK12 [nucleoplasm]
CCNK:CDK13 [nucleoplasm]
hasMember
CCNT1,CCNT2,CCNK [nucleoplasm]
Other forms of this molecule
CCNT2 [nucleoplasm]
CCNT1 [nucleoplasm]
Inferred From
CCNK [nucleoplasm] (Homo sapiens)
Cross References
RefSeq
NP_012528.1
PRO
P46962
Interactors (3)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q03957
3
CDK13 [ficolin-1-rich granule lumen]
(R-SCE-6801374)
CDK13 [extracellular region]
(R-SCE-6806442)
CDK13 [nucleoplasm]
(R-SCE-6797014)
0.859
12
UniProt:P46963 CTK3
0.857
13
UniProt:P11484
23
HSPA8 [nucleoplasm]
(R-SCE-5082380-4)
HSPA8 [cytosol]
(R-SCE-264476-4)
HSPA6 [ficolin-1-rich granule lumen]
(R-SCE-6801512-4)
HSPA1A [ficolin-1-rich granule lumen]
(R-SCE-6801496-4)
HSPA8 [ficolin-1-rich granule lumen]
(R-SCE-6801494-4)
HSPA1A [extracellular region]
(R-SCE-6805872-4)
HSPA6 [extracellular region]
(R-SCE-6806500-4)
HSPA8 [extracellular region]
(R-SCE-6805936-4)
HSPA8 [secretory granule lumen]
(R-SCE-6801530-4)
HSPA6 [secretory granule lumen]
(R-SCE-6801472-4)
HSPA2 [nucleoplasm]
(R-SCE-912480-4)
HSPA1L [nucleoplasm]
(R-SCE-5082367-4)
HSPA1A [nucleoplasm]
(R-SCE-6792605-4)
HSPA6 [nucleoplasm]
(R-SCE-5252088-4)
HSPA13 [nucleoplasm]
(R-SCE-5252009-4)
HSPA7 [nucleoplasm]
(R-SCE-5252047-4)
HSPA1L [cytosol]
(R-SCE-3371410-4)
HSPA2 [cytosol]
(R-SCE-3371408-4)
HSPA13 [cytosol]
(R-SCE-5251981-4)
HSPA6 [cytosol]
(R-SCE-3371521-4)
HSPA7 [cytosol]
(R-SCE-5251954-4)
HSPA1A [cytosol]
(R-SCE-6792602-4)
Me3K561-HSPA8 [nucleoplasm]
(R-SCE-8932217-4)
0.527
3
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