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RRP46 [nucleoplasm]
Stable Identifier
R-SCE-6791550
Type
Protein [EntityWithAccessionedSequence]
Species
Saccharomyces cerevisiae
Compartment
nucleoplasm
Synonyms
EXOSC5, P53256
Locations in the PathwayBrowser for interactor UniProt:P10592
Expand all
Metabolism of RNA (Saccharomyces cerevisiae)
rRNA processing (Saccharomyces cerevisiae)
rRNA processing in the nucleus and cytosol (Saccharomyces cerevisiae)
Major pathway of rRNA processing in the nucleolus and cytosol (Saccharomyces cerevisiae)
21S pre-rRNA is nucleolytically processed at site E (site2a) to yield 18SE pre-rRNA (Saccharomyces cerevisiae)
RRP46 [nucleoplasm] (Saccharomyces cerevisiae)
External Reference Information
External Reference
UniProt:P53256 RRP46
Gene Names
RRP46, YGR095C
Chain
chain:1-223
Reference Genes
BioGPS Gene:852987 RRP46
KEGG Gene (Saccharomyces cerevisiae (strain RM11-1a)):YGR095C RRP46
Monarch:852987 RRP46
NCBI Gene:852987 RRP46
Reference Transcript
RefSeq:NM_001181224.1 RRP46
Other Identifiers
1775054_at
4931_at
852987
GO:0000176
GO:0000177
GO:0000178
GO:0000467
GO:0003674
GO:0003723
GO:0005515
GO:0005575
GO:0005634
GO:0005730
GO:0005737
GO:0006364
GO:0006396
GO:0006401
GO:0006417
GO:0008150
GO:0016075
GO:0034427
GO:0034475
GO:0043144
GO:0043628
GO:0070478
GO:0070481
GO:0070651
GO:0071028
GO:0071035
GO:0071038
GO:0071042
GO:0071051
Participates
as a component of
Exosome core complex [nucleoplasm] (Saccharomyces cerevisiae)
This entity regulates
Positively
21S pre-rRNA is nucleolytically processed at site E (site2a) to yield 18SE pre-rRNA
(Saccharomyces cerevisiae)
Other forms of this molecule
RRP46 [cytosol]
Inferred From
EXOSC5 [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_011609.2
PRO
P53256
PDB
4IFD
,
5G06
,
5OKZ
,
6LQS
,
7D4I
,
5K36
,
4OO1
,
5C0W
,
7AJU
,
5C0X
,
5VZJ
,
7AJT
,
6FSZ
,
5JEA
Interactors (12)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P53859 CSL4
2
CSL4 [nucleoplasm]
(R-SCE-6791578)
CSL4 [cytosol]
(R-SCE-429841)
0.967
23
UniProt:Q08162 DIS3
2
DIS3 [nucleoplasm]
(R-SCE-6791517)
DIS3 [cytosol]
(R-SCE-429935)
0.864
17
UniProt:P46948 SKI6
2
SKI6 [nucleoplasm]
(R-SCE-6791503)
SKI6 [cytosol]
(R-SCE-430013)
0.864
10
UniProt:P48240 MTR3
2
MTR3 [nucleoplasm]
(R-SCE-6791573)
MTR3 [cytosol]
(R-SCE-429921)
0.76
7
UniProt:Q05636 RRP45
2
RRP45 [nucleoplasm]
(R-SCE-6791577)
RRP45 [cytosol]
(R-SCE-429984)
0.758
14
UniProt:P25359 RRP43
2
RRP43 [nucleoplasm]
(R-SCE-6791571)
RRP43 [cytosol]
(R-SCE-429912)
0.758
9
UniProt:Q08285 RRP40
2
RRP40 [nucleoplasm]
(R-SCE-6791572)
RRP40 [cytosol]
(R-SCE-430017)
0.758
10
UniProt:Q12277 RRP42
2
RRP42 [nucleoplasm]
(R-SCE-6791543)
RRP42 [cytosol]
(R-SCE-430030)
0.758
10
UniProt:P38792 RRP4
2
RRP4 [nucleoplasm]
(R-SCE-6791582)
RRP4 [cytosol]
(R-SCE-429999)
0.758
12
UniProt:Q12149
1
EXOSC10 [nucleoplasm]
(R-SCE-6791547)
0.688
14
UniProt:P10592
20
SSA2 [cytosol]
(R-SCE-264476)
SSA2 [ficolin-1-rich granule lumen]
(R-SCE-6801512-3)
SSA2 [ficolin-1-rich granule lumen]
(R-SCE-6801496-3)
SSA2 [ficolin-1-rich granule lumen]
(R-SCE-6801494)
SSA2 [extracellular region]
(R-SCE-6805872-3)
SSA2 [extracellular region]
(R-SCE-6806500-3)
SSA2 [extracellular region]
(R-SCE-6805936)
SSA2 [secretory granule lumen]
(R-SCE-6801530)
SSA2 [secretory granule lumen]
(R-SCE-6801472-3)
SSA2 [cytosol]
(R-SCE-3371410-3)
SSA2 [cytosol]
(R-SCE-3371408-3)
SSA2 [cytosol]
(R-SCE-6792602-3)
SSA2 [nucleoplasm]
(R-SCE-5082380)
SSA2 [nucleoplasm]
(R-SCE-6792605-3)
SSA2 [nucleoplasm]
(R-SCE-912480-3)
SSA2 [nucleoplasm]
(R-SCE-5082367-3)
SSA2 [nucleoplasm]
(R-SCE-5252082-3)
SSA2 [nucleoplasm]
(R-SCE-5252088-3)
SSA2 [nucleoplasm]
(R-SCE-5252009-3)
SSA2 [cytosol]
(R-SCE-5251948-3)
0.527
2
UniProt:P40150
17
HSPA6 [cytosol]
(R-SCE-3371521-6)
HSPA13 [cytosol]
(R-SCE-5251981-6)
HSPA14 [cytosol]
(R-SCE-5251948-6)
HSPA13 [nucleoplasm]
(R-SCE-5252009-6)
HSPA6 [nucleoplasm]
(R-SCE-5252088-6)
HSPA14 [nucleoplasm]
(R-SCE-5252082-6)
HSPA1L [nucleoplasm]
(R-SCE-5082367-6)
HSPA2 [nucleoplasm]
(R-SCE-912480-6)
HSPA1A [nucleoplasm]
(R-SCE-6792605-6)
HSPA1A [cytosol]
(R-SCE-6792602-6)
HSPA2 [cytosol]
(R-SCE-3371408-6)
HSPA1L [cytosol]
(R-SCE-3371410-6)
HSPA6 [secretory granule lumen]
(R-SCE-6801472-6)
HSPA6 [extracellular region]
(R-SCE-6806500-6)
HSPA1A [extracellular region]
(R-SCE-6805872-6)
HSPA1A [ficolin-1-rich granule lumen]
(R-SCE-6801496-6)
HSPA6 [ficolin-1-rich granule lumen]
(R-SCE-6801512-6)
0.527
2
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