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Ncbp1 [cytosol]
Stable Identifier
R-RNO-162459
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
cytosol
Synonyms
NCBP1, Q56A27
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Rattus norvegicus)
Nonsense-Mediated Decay (NMD) (Rattus norvegicus)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Rattus norvegicus)
Decay of mRNA in SMG6:SMG5:SMG7:mRNA complex (Rattus norvegicus)
Cap Binding Complex (CBC) [cytosol] (Rattus norvegicus)
Ncbp1 [cytosol] (Rattus norvegicus)
mRNA Cleaved by SMG6 [cytosol] (Rattus norvegicus)
Cap Binding Complex (CBC) [cytosol] (Rattus norvegicus)
Ncbp1 [cytosol] (Rattus norvegicus)
SMG1 phosphorylates UPF1 (enhanced by Exon Junction Complex) (Rattus norvegicus)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Rattus norvegicus)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Rattus norvegicus)
mRNA Complex with a Premature Termination Codon Preceding an Exon Junction [cytosol] (Rattus norvegicus)
Cap Binding Complex (CBC) [cytosol] (Rattus norvegicus)
Ncbp1 [cytosol] (Rattus norvegicus)
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Rattus norvegicus)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Rattus norvegicus)
mRNA Complex with a Premature Termination Codon Preceding an Exon Junction [cytosol] (Rattus norvegicus)
Cap Binding Complex (CBC) [cytosol] (Rattus norvegicus)
Ncbp1 [cytosol] (Rattus norvegicus)
SMG6 hydrolyzes mRNA with premature termination codon (Rattus norvegicus)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Rattus norvegicus)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Rattus norvegicus)
mRNA Complex with a Premature Termination Codon Preceding an Exon Junction [cytosol] (Rattus norvegicus)
Cap Binding Complex (CBC) [cytosol] (Rattus norvegicus)
Ncbp1 [cytosol] (Rattus norvegicus)
mRNA Cleaved by SMG6 [cytosol] (Rattus norvegicus)
Cap Binding Complex (CBC) [cytosol] (Rattus norvegicus)
Ncbp1 [cytosol] (Rattus norvegicus)
UPF1 binds an mRNP with a termination codon preceding an Exon Junction Complex (Rattus norvegicus)
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Rattus norvegicus)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Rattus norvegicus)
mRNA Complex with a Premature Termination Codon Preceding an Exon Junction [cytosol] (Rattus norvegicus)
Cap Binding Complex (CBC) [cytosol] (Rattus norvegicus)
Ncbp1 [cytosol] (Rattus norvegicus)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Rattus norvegicus)
mRNA Complex with a Premature Termination Codon Preceding an Exon Junction [cytosol] (Rattus norvegicus)
Cap Binding Complex (CBC) [cytosol] (Rattus norvegicus)
Ncbp1 [cytosol] (Rattus norvegicus)
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Rattus norvegicus)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Rattus norvegicus)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Rattus norvegicus)
mRNA Complex with a Premature Termination Codon Preceding an Exon Junction [cytosol] (Rattus norvegicus)
Cap Binding Complex (CBC) [cytosol] (Rattus norvegicus)
Ncbp1 [cytosol] (Rattus norvegicus)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Rattus norvegicus)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Rattus norvegicus)
mRNA Complex with a Premature Termination Codon Preceding an Exon Junction [cytosol] (Rattus norvegicus)
Cap Binding Complex (CBC) [cytosol] (Rattus norvegicus)
Ncbp1 [cytosol] (Rattus norvegicus)
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) (Rattus norvegicus)
Formation of UPF1:eRF3 complex on mRNA with a premature termination codon and no Exon Junction Complex (Rattus norvegicus)
Translated mRNA Complex with Premature Termination Codon Not Preceding Exon Junction [cytosol] (Rattus norvegicus)
mRNA Complex with a Premature Termination Codon Not Preceding an Exon Junction [cytosol] (Rattus norvegicus)
Cap Binding Complex (CBC) [cytosol] (Rattus norvegicus)
Ncbp1 [cytosol] (Rattus norvegicus)
UPF1:eRF3 Complex on Translated mRNA [cytosol] (Rattus norvegicus)
Translated mRNA Complex with Premature Termination Codon Not Preceding Exon Junction [cytosol] (Rattus norvegicus)
mRNA Complex with a Premature Termination Codon Not Preceding an Exon Junction [cytosol] (Rattus norvegicus)
Cap Binding Complex (CBC) [cytosol] (Rattus norvegicus)
Ncbp1 [cytosol] (Rattus norvegicus)
Processing of Capped Intron-Containing Pre-mRNA (Rattus norvegicus)
Transport of Mature Transcript to Cytoplasm (Rattus norvegicus)
Transport of Mature mRNA derived from an Intron-Containing Transcript (Rattus norvegicus)
Transport of the export-competent mRNP complex through the NPC (Rattus norvegicus)
NPC:NXF1:NXT1:EJC:CBC:mRNA [cytosol] (Rattus norvegicus)
Cap Binding Complex (CBC) [cytosol] (Rattus norvegicus)
Ncbp1 [cytosol] (Rattus norvegicus)
mRNP complex dissociates from cytosolic face of NPC (Rattus norvegicus)
NPC:NXF1:NXT1:EJC:CBC:mRNA [cytosol] (Rattus norvegicus)
Cap Binding Complex (CBC) [cytosol] (Rattus norvegicus)
Ncbp1 [cytosol] (Rattus norvegicus)
mRNA:CBC:EJC:POLDIP3 [cytosol] (Rattus norvegicus)
Cap Binding Complex (CBC) [cytosol] (Rattus norvegicus)
Ncbp1 [cytosol] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:Q56A27
Gene Names
Ncbp1
Reference Genes
BioGPS Gene:298075 Ncbp1
ENSEMBL:ENSRNOG00000023605
ENSEMBL:ENSRNOG00000023605.5 Ncbp1
ENSEMBL:ENSRNOG00055020292
ENSEMBL:ENSRNOG00060005675
ENSEMBL:ENSRNOG00065010368
KEGG Gene (Rattus norvegicus):298075 Ncbp1
Monarch:298075 Ncbp1
NCBI Gene:298075 Ncbp1
UCSC:Q56A27 Ncbp1
Reference Transcript
RefSeq:NM_001014785.1 Ncbp1
Other Identifiers
10868829
1373978_at
1378191_at
17798604
298075
5673564
5734399
5755494
5756603
5821253
5836588
5841358
5845838
5870596
5907663
5953657
6002608
6027772
6079726
6115577
6122760
6151296
6192640
6314923
6358108
6409560
6505416
6520599
6529799
6535198
6601678
6633345
6642136
6665050
6686262
6690774
A_44_P1015220
A_44_P1056473
GE14883
GO:0000184
GO:0000245
GO:0000339
GO:0000340
GO:0003723
GO:0005515
GO:0005634
GO:0005654
GO:0005737
GO:0005739
GO:0005829
GO:0005845
GO:0005846
GO:0006351
GO:0006370
GO:0006401
GO:0006406
GO:0006408
GO:0006446
GO:0006913
GO:0008334
GO:0016070
GO:0016071
GO:0030307
GO:0031442
GO:0034518
GO:0042789
GO:0043226
GO:0048026
GO:0051607
GO:0065003
GO:0098542
GO:1990904
ILMN_1357484
PH_rn_0004697
rc_AI029428_s_at
rc_AI235047_at
Participates
as a component of
Cap Binding Complex (CBC) [cytosol] (Rattus norvegicus)
Other forms of this molecule
Ncbp1 [nucleoplasm]
Inferred From
NCBP1 [cytosol]
(Homo sapiens)
Cross References
RefSeq
NP_001014785.1
Ensembl
ENSRNOP00000077595
,
ENSRNOG00000023605
,
ENSRNOT00000109965
PRO
Q56A27
RGD
1308973
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