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Prpf19 [nucleoplasm]
Stable Identifier
R-MMU-5420907
Type
Protein [EntityWithAccessionedSequence]
Species
Mus musculus
Compartment
nucleoplasm
Synonyms
PRPF19, Q99KP6
Locations in the PathwayBrowser
Expand all
DNA Repair (Mus musculus)
Nucleotide Excision Repair (Mus musculus)
Transcription-Coupled Nucleotide Excision Repair (TC-NER) (Mus musculus)
Dual incision in TC-NER (Mus musculus)
3' incision by ERCC5 (XPG) in TC-NER (Mus musculus)
TC-NER incision complex: 5'-incised damaged DNA:trimmed nascent mRNA:(PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Mus musculus)
XAB2 complex [nucleoplasm] (Mus musculus)
Prpf19 [nucleoplasm] (Mus musculus)
TC-NER post-incision complex:incised DNA without lesion:trimmed nascent mRNA:PCNA:(PCNA:POLD,POLE),(MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Mus musculus)
XAB2 complex [nucleoplasm] (Mus musculus)
Prpf19 [nucleoplasm] (Mus musculus)
5' incision of damaged DNA strand by ERCC1:ERCC4 in TC-NER (Mus musculus)
TC-NER incision complex [nucleoplasm] (Mus musculus)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Mus musculus)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Mus musculus)
XAB2 complex [nucleoplasm] (Mus musculus)
Prpf19 [nucleoplasm] (Mus musculus)
TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm] (Mus musculus)
XAB2 complex [nucleoplasm] (Mus musculus)
Prpf19 [nucleoplasm] (Mus musculus)
Binding of ERCC1:ERCC4 (ERCC1:XPF) to pre-incision complex in TC-NER (Mus musculus)
TC-NER incision complex [nucleoplasm] (Mus musculus)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Mus musculus)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Mus musculus)
XAB2 complex [nucleoplasm] (Mus musculus)
Prpf19 [nucleoplasm] (Mus musculus)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Mus musculus)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Mus musculus)
XAB2 complex [nucleoplasm] (Mus musculus)
Prpf19 [nucleoplasm] (Mus musculus)
DNA polymerases delta, epsilon or kappa bind the TC-NER site (Mus musculus)
TC-NER incision complex: 5'-incised damaged DNA:trimmed nascent mRNA:(PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Mus musculus)
XAB2 complex [nucleoplasm] (Mus musculus)
Prpf19 [nucleoplasm] (Mus musculus)
TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm] (Mus musculus)
XAB2 complex [nucleoplasm] (Mus musculus)
Prpf19 [nucleoplasm] (Mus musculus)
ERCC2-facilitated RNA Pol II backtracking in TC-NER (Mus musculus)
TC-NER pre-incision complex [nucleoplasm] (Mus musculus)
XAB2 complex [nucleoplasm] (Mus musculus)
Prpf19 [nucleoplasm] (Mus musculus)
TC-NER pre-incision complex:Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Mus musculus)
XAB2 complex [nucleoplasm] (Mus musculus)
Prpf19 [nucleoplasm] (Mus musculus)
ERCC3-facilitated RNA Pol II backtracking in TC-NER (Mus musculus)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Mus musculus)
XAB2 complex [nucleoplasm] (Mus musculus)
Prpf19 [nucleoplasm] (Mus musculus)
TC-NER pre-incision complex:Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Mus musculus)
XAB2 complex [nucleoplasm] (Mus musculus)
Prpf19 [nucleoplasm] (Mus musculus)
ERCC5 and RPA bind TC-NER site (Mus musculus)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Mus musculus)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Mus musculus)
XAB2 complex [nucleoplasm] (Mus musculus)
Prpf19 [nucleoplasm] (Mus musculus)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Mus musculus)
XAB2 complex [nucleoplasm] (Mus musculus)
Prpf19 [nucleoplasm] (Mus musculus)
Formation of TC-NER Pre-Incision Complex (Mus musculus)
Assembly of the pre-incision complex in TC-NER (Mus musculus)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:Ub:ERCC6:ERCC8:DDB1:CUL4:RBX1:UVSSA:USP7:XAB2 complex:XPA:TCEA1:HMGN1:EP300 [nucleoplasm] (Mus musculus)
XAB2 complex [nucleoplasm] (Mus musculus)
Prpf19 [nucleoplasm] (Mus musculus)
XAB2 complex [nucleoplasm] (Mus musculus)
Prpf19 [nucleoplasm] (Mus musculus)
UVSSA:USP7 deubiquitinates ERCC6 (Mus musculus)
TC-NER pre-incision complex [nucleoplasm] (Mus musculus)
XAB2 complex [nucleoplasm] (Mus musculus)
Prpf19 [nucleoplasm] (Mus musculus)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:Ub:ERCC6:ERCC8:DDB1:CUL4:RBX1:UVSSA:USP7:XAB2 complex:XPA:TCEA1:HMGN1:EP300 [nucleoplasm] (Mus musculus)
XAB2 complex [nucleoplasm] (Mus musculus)
Prpf19 [nucleoplasm] (Mus musculus)
Gap-filling DNA repair synthesis and ligation in TC-NER (Mus musculus)
Ligation of newly synthesized repair patch to incised DNA in TC-NER (Mus musculus)
TC-NER post-incision complex:SSB-dsDNA:trimmed nascent mRNA: (PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Mus musculus)
XAB2 complex [nucleoplasm] (Mus musculus)
Prpf19 [nucleoplasm] (Mus musculus)
TC-NER post-incision complex:dsDNA with transcription bubble [nucleoplasm] (Mus musculus)
XAB2 complex [nucleoplasm] (Mus musculus)
Prpf19 [nucleoplasm] (Mus musculus)
Repair DNA synthesis of ~27-30 bases long patch by POLD, POLE or POLK in TC-NER (Mus musculus)
TC-NER post-incision complex:SSB-dsDNA:trimmed nascent mRNA: (PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Mus musculus)
XAB2 complex [nucleoplasm] (Mus musculus)
Prpf19 [nucleoplasm] (Mus musculus)
TC-NER post-incision complex:incised DNA without lesion:trimmed nascent mRNA:PCNA:(PCNA:POLD,POLE),(MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Mus musculus)
XAB2 complex [nucleoplasm] (Mus musculus)
Prpf19 [nucleoplasm] (Mus musculus)
Metabolism of RNA (Mus musculus)
Processing of Capped Intron-Containing Pre-mRNA (Mus musculus)
mRNA Splicing (Mus musculus)
mRNA Splicing - Major Pathway (Mus musculus)
Formation of the Spliceosomal Bact complex (Mus musculus)
PRP19-CDC5L complex [nucleoplasm] (Mus musculus)
Prpf19 [nucleoplasm] (Mus musculus)
Spliceosomal Bact complex [nucleoplasm] (Mus musculus)
PRP19-CDC5L complex [nucleoplasm] (Mus musculus)
Prpf19 [nucleoplasm] (Mus musculus)
Formation of the Spliceosomal C* complex (Mus musculus)
Spliceosomal C complex [nucleoplasm] (Mus musculus)
PRP19-CDC5L complex [nucleoplasm] (Mus musculus)
Prpf19 [nucleoplasm] (Mus musculus)
Spliceosomal C* complex [nucleoplasm] (Mus musculus)
PRP19-CDC5L complex [nucleoplasm] (Mus musculus)
Prpf19 [nucleoplasm] (Mus musculus)
Formation of the Spliceosomal P complex and exon ligation (Mus musculus)
Spliceosomal C* complex [nucleoplasm] (Mus musculus)
PRP19-CDC5L complex [nucleoplasm] (Mus musculus)
Prpf19 [nucleoplasm] (Mus musculus)
Spliceosomal P complex [nucleoplasm] (Mus musculus)
PRP19-CDC5L complex [nucleoplasm] (Mus musculus)
Prpf19 [nucleoplasm] (Mus musculus)
External Reference Information
External Reference
UniProt:Q99KP6
Gene Names
Prpf19
Reference Genes
BioGPS Gene:28000 Prpf19
ENSEMBL:ENSMUSG00000024735
ENSEMBL:ENSMUSG00000024735.14 Prpf19
Monarch:28000 Prpf19
NCBI Gene:28000 Prpf19
UCSC:Q99KP6 Prpf19
Reference Transcript
RefSeq:NM_134129.4 Prpf19
RefSeq:NM_001253843.1 Prpf19
RefSeq:NM_001253844.1 Prpf19
Other Identifiers
10461568
1419839_x_at
1444939_at
1449635_at
1456531_x_at
1460633_at
17357611
28000
4359220
4486385
4531506
4557297
4632532
4664329
4709919
4792646
4852570
4932190
4953358
4954041
4983542
5009221
5083573
5152302
5216806
5268598
5297359
5372929
5390814
5393449
5438520
5450389
5471572
5558139
5607326
97395_at
A_51_P113784
GE102237
GE128215
GE1559633
GO:0000077
GO:0000209
GO:0000228
GO:0000244
GO:0000245
GO:0000398
GO:0000974
GO:0003824
GO:0004842
GO:0005515
GO:0005634
GO:0005654
GO:0005662
GO:0005681
GO:0005694
GO:0005737
GO:0005811
GO:0005819
GO:0005856
GO:0006281
GO:0006303
GO:0006397
GO:0006629
GO:0006974
GO:0008104
GO:0008380
GO:0008610
GO:0010498
GO:0016071
GO:0016567
GO:0016607
GO:0016740
GO:0023052
GO:0030154
GO:0030163
GO:0034450
GO:0035861
GO:0036211
GO:0042802
GO:0043226
GO:0048026
GO:0048711
GO:0048856
GO:0061630
GO:0065003
GO:0070534
GO:0071006
GO:0071007
GO:0071013
GO:0140096
ILMN_1217333
ILMN_2673756
ILMN_2934532
ILMN_2934533
ILMN_2934534
Msa.31208.0_s_at
aa231428_s_at
mMC010480
Participates
as a component of
PRP19-CDC5L complex [nucleoplasm] (Mus musculus)
XAB2 complex [nucleoplasm] (Mus musculus)
Inferred From
PRPF19 [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_001240773.1
,
NP_598890.1
,
NP_001240772.1
Ensembl
ENSMUST00000179297
,
ENSMUST00000025642
,
ENSMUSP00000025642
,
ENSMUSG00000024735
,
ENSMUSP00000136858
PRO
Q99KP6
MGI
106247
PDB
8D5K
,
8D5J
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