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SMG7 [cytosol]
Stable Identifier
R-HSA-927838
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
cytosol
Synonyms
Protein SMG7, SMG7_HUMAN
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Homo sapiens)
Nonsense-Mediated Decay (NMD) (Homo sapiens)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Homo sapiens)
Decay of mRNA in SMG6:SMG5:SMG7:mRNA complex (Homo sapiens)
SMG7 [cytosol] (Homo sapiens)
mRNA Cleaved by SMG6 [cytosol] (Homo sapiens)
SMG7 [cytosol] (Homo sapiens)
SMG6 hydrolyzes mRNA with premature termination codon (Homo sapiens)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Homo sapiens)
SMG7 [cytosol] (Homo sapiens)
mRNA Cleaved by SMG6 [cytosol] (Homo sapiens)
SMG7 [cytosol] (Homo sapiens)
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Homo sapiens)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Homo sapiens)
SMG7 [cytosol] (Homo sapiens)
SMG7 [cytosol] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q92540 SMG7
Gene Names
SMG7, C1orf16, EST1C, KIAA0250
Chain
initiator methionine:, chain:2-1137
Reference Genes
BioGPS Gene:9887 SMG7
COSMIC (genes):SMG7 SMG7
CTD Gene:9887 SMG7
dbSNP Gene:9887 SMG7
ENSEMBL:ENSG00000116698 SMG7
ENSEMBL_homo_sapiens_GENE:ENSG00000116698.22 SMG7
HGNC:16792 SMG7
KEGG Gene (Homo sapiens):9887 SMG7
Monarch:9887 SMG7
NCBI Gene:9887 SMG7
OMIM:610964 SMG7
UCSC:Q92540 SMG7
Reference Transcript
RefSeq:NM_201569.2 SMG7
RefSeq:NM_201568.2 SMG7
RefSeq:NM_173156.2 SMG7
RefSeq:NM_001174061.1 SMG7
Other Identifiers
11718521_a_at
11718522_a_at
11755243_a_at
16674880
201793_PM_x_at
201793_x_at
201794_PM_s_at
201794_s_at
217189_PM_s_at
217189_s_at
2371256
2371257
2371258
2371267
2371270
2371271
2371274
2371276
2371277
2371278
2371279
2371282
2371283
2371285
2371288
2371290
2371291
2371292
2371293
2371294
2371295
2371296
2371298
2371299
2371302
2371303
2371305
2371306
2371309
2371310
2371311
2371312
2371313
2371314
2371315
2371316
39770_at
7908097
9887
A_14_P102200
A_14_P119364
A_23_P201647
D87437_at
GE57394
GO:0000184
GO:0003677
GO:0003723
GO:0005515
GO:0005634
GO:0005697
GO:0005737
GO:0005829
GO:0006406
GO:0006913
GO:0016071
GO:0035303
GO:0042162
GO:0043226
GO:0051721
GO:0070034
HMNXSV003046968
Hs.15087.0.A1_3p_a_at
Hs.15087.1.A1_3p_a_at
ILMN_1690469
ILMN_1706553
ILMN_2368597
PH_hs_0022121
TC01001586.hg
g7662023_3p_a_at
Participates
as an output of
Decay of mRNA in SMG6:SMG5:SMG7:mRNA complex (Homo sapiens)
as an input of
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Homo sapiens)
as a component of
mRNA Cleaved by SMG6 [cytosol] (Homo sapiens)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Homo sapiens)
Inferred To
smg7 [cytosol]
(Danio rerio)
smg7 [cytosol]
(Xenopus tropicalis)
Ghost homologue of SMG7 [cytosol]
(Caenorhabditis elegans)
Ghost homologue of SMG7 [cytosol]
(Dictyostelium discoideum)
Ghost homologue of SMG7 [cytosol]
(Drosophila melanogaster)
Ghost homologue of SMG7 [cytosol]
(Plasmodium falciparum)
Homologues of SMG7 [cytosol]
(Saccharomyces cerevisiae)
SMG7 [cytosol]
(Bos taurus)
SMG7 [cytosol]
(Canis familiaris)
SMG7 [cytosol]
(Gallus gallus)
SMG7 [cytosol]
(Schizosaccharomyces pombe)
SMG7 [cytosol]
(Sus scrofa)
Smg7 [cytosol]
(Mus musculus)
Smg7 [cytosol]
(Rattus norvegicus)
ESL2 [cytosol]
(Saccharomyces cerevisiae)
EST1 [cytosol]
(Saccharomyces cerevisiae)
EBS1 [cytosol]
(Saccharomyces cerevisiae)
ESL1 [cytosol]
(Saccharomyces cerevisiae)
Cross References
RefSeq
NP_001167532.1
,
NP_775179.1
,
NP_963863.2
,
NP_963862.1
OpenTargets
ENSG00000116698
GeneCards
Q92540
HPA
ENSG00000116698-SMG7
Ensembl
ENSP00000340766
,
ENSG00000116698
,
ENST00000507469
,
ENST00000347615
,
ENST00000508461
,
ENSP00000425133
,
ENSP00000421358
,
ENST00000515829
,
ENSP00000426915
PRO
Q92540
Pharos - Targets
Q92540
PDB
1YA0
Interactors (4)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q92900-2 UPF1
0.527
2
UniProt:Q9UPR3 SMG5
1
SMG5 [cytosol]
(R-HSA-927867)
0.499
5
UniProt:Q92900 UPF1
2
UPF1 [cytosol]
(R-HSA-927734)
p-4S-UPF1 [cytosol]
(R-HSA-927856)
0.499
3
UniProt:Q96Q15 SMG1
1
SMG1 [cytosol]
(R-HSA-927760)
0.462
2
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