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zgc:86748 [cytosol]
Stable Identifier
R-DRE-72406
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
cytosol
Synonyms
RPL11, Q6IQI6
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Danio rerio)
Nonsense-Mediated Decay (NMD) (Danio rerio)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Danio rerio)
SMG1 phosphorylates UPF1 (enhanced by Exon Junction Complex) (Danio rerio)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
zgc:86748 [cytosol] (Danio rerio)
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
zgc:86748 [cytosol] (Danio rerio)
SMG6 hydrolyzes mRNA with premature termination codon (Danio rerio)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
zgc:86748 [cytosol] (Danio rerio)
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Danio rerio)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
zgc:86748 [cytosol] (Danio rerio)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
zgc:86748 [cytosol] (Danio rerio)
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) (Danio rerio)
Formation of UPF1:eRF3 complex on mRNA with a premature termination codon and no Exon Junction Complex (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Not Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
zgc:86748 [cytosol] (Danio rerio)
UPF1:eRF3 Complex on Translated mRNA [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Not Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
zgc:86748 [cytosol] (Danio rerio)
Metabolism of proteins (Danio rerio)
Translation (Danio rerio)
Eukaryotic Translation Initiation (Danio rerio)
Cap-dependent Translation Initiation (Danio rerio)
Formation of a pool of free 40S subunits (Danio rerio)
Release of 40S and 60S subunits from the 80S ribosome (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
zgc:86748 [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
zgc:86748 [cytosol] (Danio rerio)
L13a-mediated translational silencing of Ceruloplasmin expression (Danio rerio)
Dissociation of L13a from the 60s ribosomal subunit (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
zgc:86748 [cytosol] (Danio rerio)
60s ribosomal complex lacking L13a subunit [cytosol] (Danio rerio)
zgc:86748 [cytosol] (Danio rerio)
SRP-dependent cotranslational protein targeting to membrane (Danio rerio)
Nascent polypeptide:mRNA:ribosome complex binds signal recognition particle (SRP) (Danio rerio)
SRP:polypeptide+signal:ribosome [cytosol] (Danio rerio)
ribosome:mRNA:polypeptide+signal [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
zgc:86748 [cytosol] (Danio rerio)
ribosome:mRNA:polypeptide+signal [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
zgc:86748 [cytosol] (Danio rerio)
External Reference Information
External Reference
UniProt:Q6IQI6
Gene Names
zgc:86748
Reference Genes
BioGPS Gene:415229 zgc:86748
ENSEMBL:ENSDARG00000043509
ENSEMBL:ENSDARG00000043509.7 zgc:86748
KEGG Gene (Danio rerio):415229 zgc:86748
Monarch:415229 zgc:86748
NCBI Gene:415229 zgc:86748
Reference Transcript
RefSeq:NM_001002139.1 zgc:86748
Other Identifiers
13071119
415229
A_15_P120723
A_15_P263591
A_15_P671431
DRER08904
DRER10479
Dr.1353.1.S1_at
ENSDART00000063870
ENSDART00000063870_1
ENSDART00000063870_2
GO:0002376
GO:0003723
GO:0003735
GO:0005198
GO:0005829
GO:0005840
GO:0006412
GO:0006915
GO:0012501
GO:0022625
GO:0030097
GO:0030154
GO:0030218
GO:0042541
GO:0042593
GO:0043009
GO:0043226
GO:0045088
GO:0048821
GO:0048856
GO:0098542
GO:1990904
GT_Spec_NM_001002139.1_215975
LOLS09504
MADDr01002889
NM_001002139
ZV700S00001037
Participates
as a component of
60s ribosomal complex lacking L13a subunit [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
Inferred From
RPL11 [cytosol]
(Homo sapiens)
Cross References
RefSeq
NP_001002139.1
ZFIN
ZDB-GENE-040625-147
Ensembl
ENSDART00000063870
,
ENSDARG00000043509
,
ENSDARP00000063869
PDB
7OYA
,
7OYB
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