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aly-3 [nucleoplasm]
Stable Identifier
R-CEL-156649
Type
Protein [EntityWithAccessionedSequence]
Species
Caenorhabditis elegans
Compartment
nucleoplasm
Synonyms
ALYREF, Q21559
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Caenorhabditis elegans)
RNA Polymerase II Transcription (Caenorhabditis elegans)
RNA Polymerase II Transcription Termination (Caenorhabditis elegans)
Cleavage of mRNA at the 3'-end (Caenorhabditis elegans)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Caenorhabditis elegans)
EJC [nucleoplasm] (Caenorhabditis elegans)
aly-3 [nucleoplasm] (Caenorhabditis elegans)
TREX (DDX39B:ATP) [nucleoplasm] (Caenorhabditis elegans)
aly-3 [nucleoplasm] (Caenorhabditis elegans)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Caenorhabditis elegans)
EJC [nucleoplasm] (Caenorhabditis elegans)
aly-3 [nucleoplasm] (Caenorhabditis elegans)
TREX (DDX39B:ATP) [nucleoplasm] (Caenorhabditis elegans)
aly-3 [nucleoplasm] (Caenorhabditis elegans)
Metabolism of RNA (Caenorhabditis elegans)
Processing of Capped Intron-Containing Pre-mRNA (Caenorhabditis elegans)
Transport of Mature Transcript to Cytoplasm (Caenorhabditis elegans)
Transport of Mature mRNA derived from an Intron-Containing Transcript (Caenorhabditis elegans)
NXF1:NXT1 (TAP:p15) binds capped mRNA:CBC:EJC:TREX (minus DDX39B) (Caenorhabditis elegans)
NXF1,2:NXT1::polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Caenorhabditis elegans)
capped mRNA:CBC:EJC:TREX (minus DDX39B) [nucleoplasm] (Caenorhabditis elegans)
EJC [nucleoplasm] (Caenorhabditis elegans)
aly-3 [nucleoplasm] (Caenorhabditis elegans)
TREX (minus DDX39B) [nucleoplasm] (Caenorhabditis elegans)
aly-3 [nucleoplasm] (Caenorhabditis elegans)
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Caenorhabditis elegans)
EJC [nucleoplasm] (Caenorhabditis elegans)
aly-3 [nucleoplasm] (Caenorhabditis elegans)
TREX (DDX39B:ATP) [nucleoplasm] (Caenorhabditis elegans)
aly-3 [nucleoplasm] (Caenorhabditis elegans)
mRNA 3'-end processing (Caenorhabditis elegans)
Cleavage of mRNA at the 3'-end (Caenorhabditis elegans)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Caenorhabditis elegans)
EJC [nucleoplasm] (Caenorhabditis elegans)
aly-3 [nucleoplasm] (Caenorhabditis elegans)
TREX (DDX39B:ATP) [nucleoplasm] (Caenorhabditis elegans)
aly-3 [nucleoplasm] (Caenorhabditis elegans)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Caenorhabditis elegans)
EJC [nucleoplasm] (Caenorhabditis elegans)
aly-3 [nucleoplasm] (Caenorhabditis elegans)
TREX (DDX39B:ATP) [nucleoplasm] (Caenorhabditis elegans)
aly-3 [nucleoplasm] (Caenorhabditis elegans)
mRNA polyadenylation (Caenorhabditis elegans)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Caenorhabditis elegans)
EJC [nucleoplasm] (Caenorhabditis elegans)
aly-3 [nucleoplasm] (Caenorhabditis elegans)
TREX (DDX39B:ATP) [nucleoplasm] (Caenorhabditis elegans)
aly-3 [nucleoplasm] (Caenorhabditis elegans)
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Caenorhabditis elegans)
EJC [nucleoplasm] (Caenorhabditis elegans)
aly-3 [nucleoplasm] (Caenorhabditis elegans)
TREX (DDX39B:ATP) [nucleoplasm] (Caenorhabditis elegans)
aly-3 [nucleoplasm] (Caenorhabditis elegans)
mRNA Splicing (Caenorhabditis elegans)
mRNA Splicing - Major Pathway (Caenorhabditis elegans)
Formation of the Spliceosomal C* complex (Caenorhabditis elegans)
Spliceosomal C complex [nucleoplasm] (Caenorhabditis elegans)
aly-3 [nucleoplasm] (Caenorhabditis elegans)
Spliceosomal C* complex [nucleoplasm] (Caenorhabditis elegans)
aly-3 [nucleoplasm] (Caenorhabditis elegans)
Formation of the Spliceosomal P complex and exon ligation (Caenorhabditis elegans)
Spliceosomal C* complex [nucleoplasm] (Caenorhabditis elegans)
aly-3 [nucleoplasm] (Caenorhabditis elegans)
Spliceosomal P complex [nucleoplasm] (Caenorhabditis elegans)
spliced mRNA:EJC:CBC complex:Alternative splicing factor [nucleoplasm] (Caenorhabditis elegans)
EJC [nucleoplasm] (Caenorhabditis elegans)
aly-3 [nucleoplasm] (Caenorhabditis elegans)
External Reference Information
External Reference
UniProt:Q21559
Gene Names
aly-3
Reference Genes
BioGPS Gene:178157 aly-3
ENSEMBL:WBGene00000122
Monarch:178157 aly-3
NCBI Gene:178157 aly-3
UCSC:Q21559 aly-3
Wormbase:WBGene00000122
Reference Transcript
RefSeq:NM_001083228.2 aly-3
Other Identifiers
178157
18540886
18635287
193709_at
A_12_P147690
CE06198
CE_WBGene00000122_A
CE_WBGene00000122_B
CE_WBGene00000122_C
CGZ0011778
CGZ0030225
GO:0003676
M18.7
M18.7a_149-208_0.918_6_C
M18.7a_228-287_0.928_4_B
M18.7a_663-722_0.947_1_A
M18_7aP00206
M18_7aP00549
M18_7aP00556
WBGene00000122
cea2.c.30515
Participates
as a component of
Spliceosomal Bact complex [nucleoplasm] (Caenorhabditis elegans)
Spliceosomal B complex [nucleoplasm] (Caenorhabditis elegans)
Spliceosomal Pre-B complex [nucleoplasm] (Caenorhabditis elegans)
Nucleoplasmic mature intronless derived mRNA:TAP:Aly/Ref complex [nucleoplasm] (Caenorhabditis elegans)
Spliceosomal C complex [nucleoplasm] (Caenorhabditis elegans)
Spliceosomal C* complex [nucleoplasm] (Caenorhabditis elegans)
EJC [nucleoplasm] (Caenorhabditis elegans)
TREX (DDX39B:ATP) [nucleoplasm] (Caenorhabditis elegans)
TREX (minus DDX39B) [nucleoplasm] (Caenorhabditis elegans)
EJC [nucleoplasm] (Caenorhabditis elegans)
Mature intronless transcript derived Histone mRNA:SLBP:TAP:Aly/Ref complex [nucleoplasm] (Caenorhabditis elegans)
Mature Intronless Transcript Derived Histone mRNA:TAP:Aly/Ref complex [nucleoplasm] (Caenorhabditis elegans)
Other forms of this molecule
aly-3 [cytosol]
Inferred From
ALYREF, FYTTD1, LUZP4 [nucleoplasm]
(Homo sapiens)
ALYREF [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_001076697.1
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