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CDK9 [nucleoplasm]
Stable Identifier
R-BTA-51801
Type
Protein [EntityWithAccessionedSequence]
Species
Bos taurus
Compartment
nucleoplasm
Synonyms
Q5EAB2
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Bos taurus)
RNA Polymerase II Transcription (Bos taurus)
Generic Transcription Pathway (Bos taurus)
Transcriptional Regulation by TP53 (Bos taurus)
TP53 Regulates Transcription of DNA Repair Genes (Bos taurus)
CCNK:CDK12 binds RNA Pol II at DNA repair genes (Bos taurus)
CCNK:CDK12:Elongation Complex at DNA Repair Genes [nucleoplasm] (Bos taurus)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Bos taurus)
Hyperphosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Bos taurus)
Hyperphosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
CDK12 phosphorylates RNA Pol II CTD at DNA repair genes (Bos taurus)
CCNK:CDK12:CDK12-Phosphorylated Elongation Complex at DNA repair genes [nucleoplasm] (Bos taurus)
CDK12-Phosphorylated Elongation Complex [nucleoplasm] (Bos taurus)
CDK12-phosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
CCNK:CDK12:Elongation Complex at DNA Repair Genes [nucleoplasm] (Bos taurus)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Bos taurus)
Hyperphosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
Transcriptional activity of SMAD2/SMAD3:SMAD4 heterotrimer (Bos taurus)
SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription (Bos taurus)
Phosphorylation of SMAD2 and SMAD3 linker regions by CDK8 or CDK9 (Bos taurus)
CDK8:CCNC/ CDK9:CCNT [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
RNA Polymerase II Pre-transcription Events (Bos taurus)
2-4 nt.backtracking of Pol II complex on the template leading to elongation pausing (Bos taurus)
Paused processive elongation complex [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
Processive elongation complex [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
7-14 nt. Backtracking of Pol II complex on the template leading to elongation arrest (Bos taurus)
Processive elongation complex [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
Abortive termination of elongation after arrest (Bos taurus)
Aborted elongation complex after arrest [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
Processive elongation complex [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
Formation of P-TEFb complex (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
Resumption of elongation after recovery from pausing (Bos taurus)
Paused processive elongation complex [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
Processive elongation complex [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
TFIIS-mediated recovery of elongation from arrest (Bos taurus)
Processive elongation complex [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
RNA Polymerase II Transcription Elongation (Bos taurus)
Addition of nucleotides leads to transcript elongation (Bos taurus)
Elongation complex [nucleoplasm] (Bos taurus)
Early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
Processive elongation complex [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
Formation of RNA Pol II elongation complex (Bos taurus)
Hyperphosphorylation (Ser2) of RNA Pol II CTD by P-TEFb complex (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
Early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
Pol II elongation complex moves on the template as transcript elongates (Bos taurus)
Elongation complex prior to separation [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
Processive elongation complex [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
Separation of elongating transcript from template (Bos taurus)
Elongation complex prior to separation [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
Elongation complex with separated and uncleaved transcript [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
RNA polymerase II transcribes snRNA genes (Bos taurus)
CBCAP complex binds 7-methylguanosine cap of snRNA (Bos taurus)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:CBCAP:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Bos taurus)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Bos taurus)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
CDK7 phosphorylates serine-5 and serine-7 of heptad repeats in C-terminal domain of RNA polymerase II at snRNA promoter (Bos taurus)
RNA polymerase II (phosphoserine-5,7):Initiation factors:CDK7:snRNA gene [nucleoplasm] (Bos taurus)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
RNA polymerase II (unphosphorylated):Initiation factors at promoter of snRNA gene [nucleoplasm] (Bos taurus)
RNA polymerase II (unphosphorylated):Initiation factors [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
General transcription factors bind SNAPc:POU2F1:ZNF143:snRNA gene (Bos taurus)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
Integrator complex processes the 3' end of snRNA (Bos taurus)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:CBCAP:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Bos taurus)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:Initiation factors:snRNA gene [nucleoplasm] (Bos taurus)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
Pre-snRNA is elongated and capped with 7-methylguanosine (Bos taurus)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Bos taurus)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
RNA polymerase II (phosphoserine-5,7):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC:pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Bos taurus)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
Pre-snRNA transcript initiation, Integrator binding, LEC binding (Bos taurus)
RNA polymerase II (phosphoserine-5,7):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC:pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Bos taurus)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
RPAP2:RPRD1A,B:RPRD2:RNA polymerase II (phosphoserine-5,7):Initiation factors:snRNA gene [nucleoplasm] (Bos taurus)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
RNA polymerase II binds initiation factors at promoter of snRNA gene (U1, U2, U4, U4atac, U5, U11, U12) (Bos taurus)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
RNA polymerase II (unphosphorylated):Initiation factors at promoter of snRNA gene [nucleoplasm] (Bos taurus)
RNA polymerase II (unphosphorylated):Initiation factors [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
RPAP2 binds RNA polymerase II phosphorylated at serine-7 residues of heptad repeats in the C-terminal domain (Bos taurus)
RNA polymerase II (phosphoserine-5,7):Initiation factors:CDK7:snRNA gene [nucleoplasm] (Bos taurus)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
RPAP2:RPRD1A,B:RPRD2:RNA polymerase II (phosphoserine-5,7):Initiation factors:snRNA gene [nucleoplasm] (Bos taurus)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
Signal Transduction (Bos taurus)
Signaling by Nuclear Receptors (Bos taurus)
ESR-mediated signaling (Bos taurus)
Estrogen-dependent gene expression (Bos taurus)
ESR1:ESTG:P-TEFb recruited to paused RNA polymerase II on MYB gene (Bos taurus)
ESR1:ESTG:P-TEFb [nucleoplasm] (Bos taurus)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
MYB gene:hypophosphorylated RNA polymerase II:TFIIF:ESR1:ESTG:P-TEFb [nucleoplasm] (Bos taurus)
ESR1:ESTG:P-TEFb [nucleoplasm] (Bos taurus)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
p-TEFb phosphorylates serine 2 in RNA polymerase II CTD (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
MYB gene:hyperphosphorylated RNA polymerase II:TFIIF:ESR1:ESTG:P-TEFb [nucleoplasm] (Bos taurus)
ESR1:ESTG:P-TEFb [nucleoplasm] (Bos taurus)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
MYB gene:hypophosphorylated RNA polymerase II:TFIIF:ESR1:ESTG:P-TEFb [nucleoplasm] (Bos taurus)
ESR1:ESTG:P-TEFb [nucleoplasm] (Bos taurus)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
Signaling by TGFB family members (Bos taurus)
Signaling by TGF-beta Receptor Complex (Bos taurus)
Transcriptional activity of SMAD2/SMAD3:SMAD4 heterotrimer (Bos taurus)
SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription (Bos taurus)
Phosphorylation of SMAD2 and SMAD3 linker regions by CDK8 or CDK9 (Bos taurus)
CDK8:CCNC/ CDK9:CCNT [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
CDK9 [nucleoplasm] (Bos taurus)
External Reference Information
External Reference
UniProt:Q5EAB2
Reference Genes
BioGPS Gene:520580
ENSEMBL:ENSBTAG00000004695
ENSEMBL:ENSBTAG00000004695.6
KEGG Gene (Bos taurus):520580
Monarch:520580
NCBI Gene:520580
Reference Transcript
RefSeq:NM_001014935.2
Other Identifiers
520580
GO:0000166
GO:0000976
GO:0000978
GO:0001223
GO:0003677
GO:0003682
GO:0003723
GO:0003824
GO:0004672
GO:0004674
GO:0004693
GO:0005524
GO:0005634
GO:0005654
GO:0005737
GO:0006260
GO:0006281
GO:0006282
GO:0006325
GO:0006351
GO:0006355
GO:0006366
GO:0006468
GO:0006974
GO:0008023
GO:0008024
GO:0008353
GO:0016071
GO:0016301
GO:0016310
GO:0016605
GO:0016740
GO:0017069
GO:0019901
GO:0030154
GO:0031297
GO:0031440
GO:0032968
GO:0036211
GO:0036464
GO:0043226
GO:0043923
GO:0045944
GO:0048856
GO:0051147
GO:0051647
GO:0051726
GO:0070691
GO:0071345
GO:0097322
GO:0106310
GO:0120186
GO:0120187
GO:0140096
GO:0140673
Participates
as an input of
Formation of P-TEFb complex (Bos taurus)
as a component of
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Bos taurus)
P-TEFb complex [nucleoplasm] (Bos taurus)
Inferred From
CDK9 [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_001014935.2
Ensembl
ENSBTAG00000004695
,
ENSBTAP00000006162
,
ENSBTAT00000006162
VGNC
27136
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