Reactome: A Curated Pathway Database
Attention
The EBI data centre will be shutting down from the afternoon (BST) of Friday 26th August until the afternoon of Tuesday 30th August 2016 for essential maintenance. This might have an impact on some Reactome services and we apologize for any inconvenience.

Attributes of class 'StableIdentifier'

Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
__is_ghost 1 OTHER N/A DatabaseObject   ENUM('TRUE')
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
identifier 1 TEXT N/A StableIdentifier   TEXT
identifierVersion 1 TEXT N/A StableIdentifier   TEXT
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
oldIdentifier 1 TEXT N/A StableIdentifier   TEXT
oldIdentifierVersion 1 TEXT N/A StableIdentifier   TEXT
referenceDatabase 1 INSTANCE ReferenceDatabase StableIdentifier   INTEGER(10) UNSIGNED
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'StableIdentifier' instances

Class name Attribute name Cardinality
ReferenceMolecule stableIdentifier 1
Regulation stableIdentifier 1
Requirement stableIdentifier 1
PathwayDiagramItem stableIdentifier 1
Polymer stableIdentifier 1
ReactionVertex stableIdentifier 1
GO_MolecularFunction stableIdentifier 1
_AttributeValueBeforeChange stableIdentifier 1
InstanceEdit stableIdentifier 1
DeletedControlledVocabulary stableIdentifier 1
NegativeRegulation stableIdentifier 1
EntityWithAccessionedSequence stableIdentifier 1
FragmentInsertionModification stableIdentifier 1
DatabaseObject stableIdentifier 1
FunctionalStatusType stableIdentifier 1
ReferenceGeneProduct stableIdentifier 1
OpenSet stableIdentifier 1
Affiliation stableIdentifier 1
ReferenceRNASequence stableIdentifier 1
PsiMod stableIdentifier 1
FrontPage stableIdentifier 1
Compartment stableIdentifier 1
GroupModifiedResidue stableIdentifier 1
ModifiedResidue stableIdentifier 1
URL stableIdentifier 1
GO_CellularComponent stableIdentifier 1
PhysicalEntity stableIdentifier 1
ReactionCoordinates stableIdentifier 1
Publication stableIdentifier 1
Depolymerisation stableIdentifier 1
ReferenceDNASequence stableIdentifier 1
Book stableIdentifier 1
ReferenceIsoform stableIdentifier 1
_InstanceBeforeChange stableIdentifier 1
Figure stableIdentifier 1
_Deleted stableIdentifier 1
Person stableIdentifier 1
PathwayVertex stableIdentifier 1
EntityFunctionalStatus stableIdentifier 1
GenomeEncodedEntity stableIdentifier 1
ReferenceDatabase stableIdentifier 1
ConcurrentEventSet stableIdentifier 1
Pathway stableIdentifier 1
ReplacedResidue stableIdentifier 1
EntityVertex stableIdentifier 1
InterChainCrosslinkedResidue stableIdentifier 1
FragmentModification stableIdentifier 1
FailedReaction stableIdentifier 1
SimpleEntity stableIdentifier 1
PathwayDiagram stableIdentifier 1
FunctionalStatus stableIdentifier 1
Taxon stableIdentifier 1
EvidenceType stableIdentifier 1
ExternalOntology stableIdentifier 1
Complex stableIdentifier 1
Disease stableIdentifier 1
Species stableIdentifier 1
CrosslinkedResidue stableIdentifier 1
ReferenceGroup stableIdentifier 1
BlackBoxEvent stableIdentifier 1
ControlledVocabulary stableIdentifier 1
Event stableIdentifier 1
EntitySet stableIdentifier 1
Edge stableIdentifier 1
Reaction stableIdentifier 1
CandidateSet stableIdentifier 1
DefinedSet stableIdentifier 1
ReferenceEntity stableIdentifier 1
PositiveRegulation stableIdentifier 1
VertexSearchableTerm stableIdentifier 1
EntityCompartment stableIdentifier 1
LiteratureReference stableIdentifier 1
CellType stableIdentifier 1
SequenceOntology stableIdentifier 1
Polymerisation stableIdentifier 1
FragmentReplacedModification stableIdentifier 1
PathwayCoordinates stableIdentifier 1
GeneticallyModifiedResidue stableIdentifier 1
IntraChainCrosslinkedResidue stableIdentifier 1
_Release stableIdentifier 1
ReferenceSequence stableIdentifier 1
TranslationalModification stableIdentifier 1
FragmentDeletionModification stableIdentifier 1
OtherEntity stableIdentifier 1
CatalystActivity stableIdentifier 1
GO_BiologicalProcess stableIdentifier 1
DatabaseIdentifier stableIdentifier 1
Vertex stableIdentifier 1
AbstractModifiedResidue stableIdentifier 1
ReactionlikeEvent stableIdentifier 1
Summation stableIdentifier 1
StableIdentifier stableIdentifier 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.